IL_6SWA_197

3D structure

PDB id

6SWA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGCGGGGAAGGUGGC*GUGUUACAGCCCCCCC

Length

31 nucleotides

Bulged bases

6SWA|1|q|A|737

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SWA|1|q|G|730
6SWA|1|q|G|731
6SWA|1|q|C|732
6SWA|1|q|G|733
6SWA|1|q|G|734
6SWA|1|q|G|735
6SWA|1|q|G|736
6SWA|1|q|A|737
6SWA|1|q|A|738
6SWA|1|q|G|739
6SWA|1|q|G|740
6SWA|1|q|U|741
6SWA|1|q|G|742
6SWA|1|q|G|743
6SWA|1|q|C|744
*
6SWA|1|q|G|897
6SWA|1|q|U|898
6SWA|1|q|G|899
6SWA|1|q|U|900
6SWA|1|q|U|901
6SWA|1|q|A|902
6SWA|1|q|C|903
6SWA|1|q|A|904
6SWA|1|q|G|905
6SWA|1|q|C|906
6SWA|1|q|C|907
6SWA|1|q|C|908
6SWA|1|q|C|909
6SWA|1|q|C|910
6SWA|1|q|C|911
6SWA|1|q|C|912

Current chains

Chain q

28S ribosomal RNA (3612-MER)

Nearby chains

Chain H

60S ribosomal protein L9

Chain L

60S ribosomal protein L14

Chain Q

60S ribosomal protein L18a