IL_6SWE_011

3D structure

PDB id

6SWE (explore in PDB, NAKB, or RNA 3D Hub)

Description

IC2 head of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssi

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGCGUC*GUAAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SWE|1|2|G|1037
6SWE|1|2|G|1047
6SWE|1|2|C|1048
6SWE|1|2|G|1049
6SWE|1|2|U|1050
6SWE|1|2|C|1051
*
6SWE|1|2|G|1064
6SWE|1|2|U|1065
6SWE|1|2|A|1066
6SWE|1|2|A|1067
6SWE|1|2|C|1068

Current chains

Chain 2

16S ribosomal RNA

Nearby chains