IL_6SZS_104
3D structure
- PDB id
- 6SZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.06 Å
Loop
- Sequence
- CU*AAG
- Length
- 5 nucleotides
- Bulged bases
- 6SZS|1|A|A|2800
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6SZS_104 not in the Motif Atlas
- Geometric match to IL_7RQB_019
- Geometric discrepancy: 0.241
- The information below is about IL_7RQB_019
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_37497.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 118
Unit IDs
6SZS|1|A|C|2795
6SZS|1|A|U|2796
*
6SZS|1|A|A|2799
6SZS|1|A|A|2800
6SZS|1|A|G|2801
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: