3D structure

PDB id
6SZS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis
Experimental method
ELECTRON MICROSCOPY
Resolution
3.06 Å

Loop

Sequence
GAAG*UGUGCCUUCGGGAAC
Length
19 nucleotides
Bulged bases
6SZS|1|a|G|1032
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6SZS|1|a|G|1003
6SZS|1|a|A|1004
6SZS|1|a|A|1005
6SZS|1|a|G|1006
*
6SZS|1|a|U|1023
6SZS|1|a|G|1024
6SZS|1|a|U|1025
6SZS|1|a|G|1026
6SZS|1|a|C|1027
6SZS|1|a|C|1028
6SZS|1|a|U|1029
6SZS|1|a|U|1030
6SZS|1|a|C|1031
6SZS|1|a|G|1032
6SZS|1|a|G|1033
6SZS|1|a|G|1034
6SZS|1|a|A|1035
6SZS|1|a|A|1036
6SZS|1|a|C|1037

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain c
30S ribosomal protein S3
Chain n
30S ribosomal protein S14

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1778 s