IL_6T3R_006
3D structure
- PDB id
- 6T3R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of K+, Mg2+ and 5'-exon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.57 Å
Loop
- Sequence
- AUAUGAGG*UAAAU
- Length
- 13 nucleotides
- Bulged bases
- 6T3R|1|A|U|152, 6T3R|1|A|A|223
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T3R_006 not in the Motif Atlas
- Homologous match to IL_5J02_005
- Geometric discrepancy: 0.1749
- The information below is about IL_5J02_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6T3R|1|A|A|149
6T3R|1|A|U|150
6T3R|1|A|A|151
6T3R|1|A|U|152
6T3R|1|A|G|153
6T3R|1|A|A|154
6T3R|1|A|G|155
6T3R|1|A|G|156
*
6T3R|1|A|U|221
6T3R|1|A|A|222
6T3R|1|A|A|223
6T3R|1|A|A|224
6T3R|1|A|U|225
Current chains
- Chain A
- Group IIC Intron Ribozyme
Nearby chains
- Chain B
- Group IIC Intron Ribozyme
Coloring options: