IL_6T4Q_008
3D structure
- PDB id
- 6T4Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- AU*AGUUGU
- Length
- 8 nucleotides
- Bulged bases
- 6T4Q|1|C1|U|147
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T4Q_008 not in the Motif Atlas
- Homologous match to IL_8C3A_007
- Geometric discrepancy: 0.0764
- The information below is about IL_8C3A_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_19724.3
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
6T4Q|1|C1|A|123
6T4Q|1|C1|U|124
*
6T4Q|1|C1|A|144
6T4Q|1|C1|G|145
6T4Q|1|C1|U|146
6T4Q|1|C1|U|147
6T4Q|1|C1|G|148
6T4Q|1|C1|U|149
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain C3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LG
- 60S ribosomal protein L8-A
- Chain LN
- 60S ribosomal protein L15-A
Coloring options: