IL_6T4Q_022
3D structure
- PDB id
- 6T4Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GUUUG*CAUAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T4Q_022 not in the Motif Atlas
- Homologous match to IL_5TBW_022
- Geometric discrepancy: 0.0757
- The information below is about IL_5TBW_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74284.1
- Basepair signature
- cWW-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
6T4Q|1|C1|G|680
6T4Q|1|C1|U|681
6T4Q|1|C1|U|682
6T4Q|1|C1|U|683
6T4Q|1|C1|G|684
*
6T4Q|1|C1|C|696
6T4Q|1|C1|A|697
6T4Q|1|C1|U|698
6T4Q|1|C1|A|699
6T4Q|1|C1|C|700
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain LC
- 60S ribosomal protein L4-A
- Chain LL
- 60S ribosomal protein L13-A
- Chain LN
- 60S ribosomal protein L15-A
- Chain La
- 60S ribosomal protein L28
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