IL_6T4Q_063

3D structure

PDB id

6T4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CCUGA*UGCAGG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T4Q|1|C1|C|1562
6T4Q|1|C1|C|1563
6T4Q|1|C1|U|1564
6T4Q|1|C1|G|1565
6T4Q|1|C1|A|1566
*
6T4Q|1|C1|U|1572
6T4Q|1|C1|G|1573
6T4Q|1|C1|C|1574
6T4Q|1|C1|A|1575
6T4Q|1|C1|G|1576
6T4Q|1|C1|G|1577

Current chains

Chain C1

25S rRNA

Nearby chains

Chain C3

5.8S ribosomal RNA; 5.8S rRNA

Chain LX

60S ribosomal protein L25