IL_6T4Q_095
3D structure
- PDB id
- 6T4Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CA*UAG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T4Q_095 not in the Motif Atlas
- Geometric match to IL_7RQB_058
- Geometric discrepancy: 0.3529
- The information below is about IL_7RQB_058
- Detailed Annotation
- Single stack bend
- Broad Annotation
- Single stack bend
- Motif group
- IL_76488.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 36
Unit IDs
6T4Q|1|C1|C|2444
6T4Q|1|C1|A|2445
*
6T4Q|1|C1|U|2501
6T4Q|1|C1|A|2502
6T4Q|1|C1|G|2503
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain Li
- 60S ribosomal protein L36-A
Coloring options: