IL_6T4Q_210
3D structure
- PDB id
- 6T4Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GUCUAAC*GUAAUC
- Length
- 13 nucleotides
- Bulged bases
- 6T4Q|1|C2|A|1516
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T4Q_210 not in the Motif Atlas
- Homologous match to IL_4V88_460
- Geometric discrepancy: 0.2496
- The information below is about IL_4V88_460
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_77092.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6T4Q|1|C2|G|1488
6T4Q|1|C2|U|1489
6T4Q|1|C2|C|1490
6T4Q|1|C2|U|1491
6T4Q|1|C2|A|1492
6T4Q|1|C2|A|1493
6T4Q|1|C2|C|1494
*
6T4Q|1|C2|G|1513
6T4Q|1|C2|U|1514
6T4Q|1|C2|A|1515
6T4Q|1|C2|A|1516
6T4Q|1|C2|U|1517
6T4Q|1|C2|C|1518
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain SD
- 40S ribosomal protein S3
- Chain ST
- 40S ribosomal protein S19-A
- Chain SU
- 40S ribosomal protein S20
- Chain Sd
- 40S ribosomal protein S29-A
Coloring options: