IL_6T7I_195

3D structure

PDB id

6T7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUUG*CUUGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T7I|1|C2|A|1230
6T7I|1|C2|U|1231
6T7I|1|C2|U|1232
6T7I|1|C2|G|1233
*
6T7I|1|C2|C|1252
6T7I|1|C2|U|1253
6T7I|1|C2|U|1254
6T7I|1|C2|G|1255
6T7I|1|C2|A|1256
6T7I|1|C2|U|1257

Current chains

Chain C2

18S ribosomal RNA

Nearby chains

Chain SK

40S ribosomal protein S10-A

Chain SM

40S ribosomal protein S12

Chain Sd

40S ribosomal protein S29-A

Chain Sf

Ubiquitin-40S ribosomal protein S31