IL_6T7T_017

3D structure

PDB id

6T7T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast 80S ribosome stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAGACAUGGUGUUUUGUAUUUCACUGG*CAUAAUG

Length

34 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T7T|1|C1|C|435
6T7T|1|C1|A|436
6T7T|1|C1|G|437
6T7T|1|C1|A|438
6T7T|1|C1|C|439
6T7T|1|C1|A|440
6T7T|1|C1|U|441
6T7T|1|C1|G|442
6T7T|1|C1|G|443
6T7T|1|C1|U|444
6T7T|1|C1|G|445
6T7T|1|C1|U|446
6T7T|1|C1|U|447
6T7T|1|C1|U|448
6T7T|1|C1|U|449
6T7T|1|C1|G|450
6T7T|1|C1|U|451
6T7T|1|C1|A|486
6T7T|1|C1|U|487
6T7T|1|C1|U|488
6T7T|1|C1|U|489
6T7T|1|C1|C|490
6T7T|1|C1|A|491
6T7T|1|C1|C|492
6T7T|1|C1|U|493
6T7T|1|C1|G|494
6T7T|1|C1|G|495
*
6T7T|1|C1|C|618
6T7T|1|C1|A|619
6T7T|1|C1|U|620
6T7T|1|C1|A|621
6T7T|1|C1|A|622
6T7T|1|C1|U|623
6T7T|1|C1|G|624

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6-B

Chain LP

60S ribosomal protein L17-A

Chain Le

60S ribosomal protein L32

Chain Lf

60S ribosomal protein L33-A