IL_6T7T_037
3D structure
- PDB id
- 6T7T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGU*AU
- Length
- 5 nucleotides
- Bulged bases
- 6T7T|1|C1|G|984
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T7T_037 not in the Motif Atlas
- Geometric match to IL_5TBW_037
- Geometric discrepancy: 0.1489
- The information below is about IL_5TBW_037
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
6T7T|1|C1|A|983
6T7T|1|C1|G|984
6T7T|1|C1|U|985
*
6T7T|1|C1|A|1099
6T7T|1|C1|U|1100
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain LF
- 60S ribosomal protein L7-A
- Chain LQ
- 60S ribosomal protein L18-A
- Chain LT
- 60S ribosomal protein L21-A
- Chain Lb
- 60S ribosomal protein L29
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