IL_6T7T_094
3D structure
- PDB id
- 6T7T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 6T7T|1|C1|G|2606
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T7T_094 not in the Motif Atlas
- Geometric match to IL_5TBW_095
- Geometric discrepancy: 0.1248
- The information below is about IL_5TBW_095
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_38958.10
- Basepair signature
- cWW-cWW-cWW-tHS
- Number of instances in this motif group
- 9
Unit IDs
6T7T|1|C1|U|2423
6T7T|1|C1|A|2424
6T7T|1|C1|G|2425
*
6T7T|1|C1|U|2604
6T7T|1|C1|G|2605
6T7T|1|C1|G|2606
6T7T|1|C1|G|2607
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain 7
- Transfer RNA; tRNA
- Chain LA
- 60S ribosomal protein L2-A
- Chain LN
- 60S ribosomal protein L15-A
- Chain Lo
- 60S ribosomal protein L42-A
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