3D structure

PDB id
6T7T (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of yeast 80S ribosome stalled on poly(A) tract.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
UGGCCGGUC*GGAUUUCCA
Length
18 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6T7T|1|C2|U|650
6T7T|1|C2|G|651
6T7T|1|C2|G|652
6T7T|1|C2|C|653
6T7T|1|C2|C|654
6T7T|1|C2|G|655
6T7T|1|C2|G|656
6T7T|1|C2|U|657
6T7T|1|C2|C|658
*
6T7T|1|C2|G|676
6T7T|1|C2|G|677
6T7T|1|C2|A|678
6T7T|1|C2|U|679
6T7T|1|C2|U|680
6T7T|1|C2|U|681
6T7T|1|C2|C|682
6T7T|1|C2|C|683
6T7T|1|C2|A|684

Current chains

Chain C2
18S rRNA

Nearby chains

Chain SJ
40S ribosomal protein S9-A

Coloring options:

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