IL_6T7T_237

3D structure

PDB id

6T7T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast 80S ribosome stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCUAGACAGC*GCCGAA

Length

16 nucleotides

Bulged bases

6T7T|1|C1|A|1221

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T7T|1|C1|U|1218
6T7T|1|C1|C|1219
6T7T|1|C1|U|1220
6T7T|1|C1|A|1221
6T7T|1|C1|G|1222
6T7T|1|C1|A|1223
6T7T|1|C1|C|1224
6T7T|1|C1|A|1225
6T7T|1|C1|G|1226
6T7T|1|C1|C|1227
*
6T7T|1|C1|G|1282
6T7T|1|C1|C|1283
6T7T|1|C1|C|1284
6T7T|1|C1|G|1285
6T7T|1|C1|A|1286
6T7T|1|C1|A|1287

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LS

60S ribosomal protein L20-A

Chain Lm

Ubiquitin-60S ribosomal protein L40