IL_6T83_017

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CAGACAUGGUGUUUUGUAUUUCACUGG*CAUAAUG

Length

34 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T83|1|1b|C|435
6T83|1|1b|A|436
6T83|1|1b|G|437
6T83|1|1b|A|438
6T83|1|1b|C|439
6T83|1|1b|A|440
6T83|1|1b|U|441
6T83|1|1b|G|442
6T83|1|1b|G|443
6T83|1|1b|U|444
6T83|1|1b|G|445
6T83|1|1b|U|446
6T83|1|1b|U|447
6T83|1|1b|U|448
6T83|1|1b|U|449
6T83|1|1b|G|450
6T83|1|1b|U|451
6T83|1|1b|A|486
6T83|1|1b|U|487
6T83|1|1b|U|488
6T83|1|1b|U|489
6T83|1|1b|C|490
6T83|1|1b|A|491
6T83|1|1b|C|492
6T83|1|1b|U|493
6T83|1|1b|G|494
6T83|1|1b|G|495
*
6T83|1|1b|C|618
6T83|1|1b|A|619
6T83|1|1b|U|620
6T83|1|1b|A|621
6T83|1|1b|A|622
6T83|1|1b|U|623
6T83|1|1b|G|624

Current chains

Chain 1b

25S rRNA

Nearby chains

Chain Ey

60S ribosomal protein L6-A

Chain Py

60S ribosomal protein L17-A

Chain ey

60S ribosomal protein L32

Chain fy

60S ribosomal protein L33-A