IL_6T83_027

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CCG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6T83_027 not in the Motif Atlas

Geometric match to IL_7RQB_017

Geometric discrepancy: 0.1679

The information below is about IL_7RQB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

6T83|1|1b|C|803
6T83|1|1b|C|804
6T83|1|1b|G|805
*
6T83|1|1b|C|938
6T83|1|1b|U|939
6T83|1|1b|G|940

Current chains

Chain 1b

25S rRNA

Nearby chains

Chain Cy

60S ribosomal protein L4-A

Chain ay

60S ribosomal protein L28