IL_6T83_148
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GUA*UUUUC
- Length
- 8 nucleotides
- Bulged bases
- 6T83|1|2b|U|260
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_148 not in the Motif Atlas
- Geometric match to IL_7RQB_022
- Geometric discrepancy: 0.2503
- The information below is about IL_7RQB_022
- Detailed Annotation
- Major groove platform with extra cWW
- Broad Annotation
- Major groove platform
- Motif group
- IL_05564.2
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 14
Unit IDs
6T83|1|2b|G|204
6T83|1|2b|U|205
6T83|1|2b|A|206
*
6T83|1|2b|U|259
6T83|1|2b|U|260
6T83|1|2b|U|261
6T83|1|2b|U|262
6T83|1|2b|C|263
Current chains
- Chain 2b
- 18S rRNA
Nearby chains
- Chain Eb
- 40S ribosomal protein S4-A
- Chain Ib
- 40S ribosomal protein S8-A
Coloring options: