IL_6T83_159
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CCAAU*AG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_159 not in the Motif Atlas
- Geometric match to IL_4LFB_015
- Geometric discrepancy: 0.1832
- The information below is about IL_4LFB_015
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_03109.3
- Basepair signature
- cWW-cWS-tWH-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
6T83|1|2b|C|443
6T83|1|2b|C|444
6T83|1|2b|A|445
6T83|1|2b|A|446
6T83|1|2b|U|447
*
6T83|1|2b|A|460
6T83|1|2b|G|461
Current chains
- Chain 2b
- 18S rRNA
Nearby chains
- Chain Eb
- 40S ribosomal protein S4-A
- Chain Jb
- 40S ribosomal protein S9-A
- Chain Yb
- 40S ribosomal protein S24-A
Coloring options: