IL_6T83_170
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CGUAGU*AUCAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_170 not in the Motif Atlas
- Geometric match to IL_8ZA4_001
- Geometric discrepancy: 0.3862
- The information below is about IL_8ZA4_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76308.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6T83|1|2b|C|627
6T83|1|2b|G|628
6T83|1|2b|U|629
6T83|1|2b|A|630
6T83|1|2b|G|631
6T83|1|2b|U|632
*
6T83|1|2b|A|967
6T83|1|2b|U|968
6T83|1|2b|C|969
6T83|1|2b|A|970
6T83|1|2b|A|971
6T83|1|2b|G|972
Current chains
- Chain 2b
- 18S rRNA
Nearby chains
- Chain 1b
- Large subunit ribosomal RNA; LSU rRNA
- Chain Lb
- 40S ribosomal protein S11-A
- Chain Nb
- 40S ribosomal protein S13
- Chain Wb
- 40S ribosomal protein S22-A
- Chain Xb
- 40S ribosomal protein S23-A
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