IL_6T83_172

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UGGCCGGUC*GGAUUUCCA

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T83|1|2b|U|650
6T83|1|2b|G|651
6T83|1|2b|G|652
6T83|1|2b|C|653
6T83|1|2b|C|654
6T83|1|2b|G|655
6T83|1|2b|G|656
6T83|1|2b|U|657
6T83|1|2b|C|658
*
6T83|1|2b|G|676
6T83|1|2b|G|677
6T83|1|2b|A|678
6T83|1|2b|U|679
6T83|1|2b|U|680
6T83|1|2b|U|681
6T83|1|2b|C|682
6T83|1|2b|C|683
6T83|1|2b|A|684

Current chains

Chain 2b

18S rRNA

Nearby chains

Chain Aa

Large subunit ribosomal RNA; LSU rRNA

Chain Jb

40S ribosomal protein S9-A

Chain R

60S ribosomal protein L34-A