IL_6T83_241
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CUGAACUU*AUCAAUAAG
- Length
- 17 nucleotides
- Bulged bases
- 6T83|1|Aa|A|49
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_241 not in the Motif Atlas
- Geometric match to IL_5TBW_005
- Geometric discrepancy: 0.1536
- The information below is about IL_5TBW_005
- Detailed Annotation
- tSH-tHW-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_35728.2
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
6T83|1|Aa|C|31
6T83|1|Aa|U|32
6T83|1|Aa|G|33
6T83|1|Aa|A|34
6T83|1|Aa|A|35
6T83|1|Aa|C|36
6T83|1|Aa|U|37
6T83|1|Aa|U|38
*
6T83|1|Aa|A|45
6T83|1|Aa|U|46
6T83|1|Aa|C|47
6T83|1|Aa|A|48
6T83|1|Aa|A|49
6T83|1|Aa|U|50
6T83|1|Aa|A|51
6T83|1|Aa|A|52
6T83|1|Aa|G|53
Current chains
- Chain Aa
- 25S rRNA
Nearby chains
- Chain L
- 60S ribosomal protein L28
- Chain Na
- 60S ribosomal protein L13-A
- Chain Pa
- 60S ribosomal protein L15-A
- Chain U
- 60S ribosomal protein L37-A
- Chain Z
- 60S ribosomal protein L42-A
Coloring options: