IL_6T83_251
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GUGAAAU*ACGGAUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_251 not in the Motif Atlas
- Homologous match to IL_5TBW_015
- Geometric discrepancy: 0.1544
- The information below is about IL_5TBW_015
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_66414.7
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
6T83|1|Aa|G|404
6T83|1|Aa|U|405
6T83|1|Aa|G|406
6T83|1|Aa|A|407
6T83|1|Aa|A|408
6T83|1|Aa|A|409
6T83|1|Aa|U|410
*
6T83|1|Ca|A|13
6T83|1|Ca|C|14
6T83|1|Ca|G|15
6T83|1|Ca|G|16
6T83|1|Ca|A|17
6T83|1|Ca|U|18
6T83|1|Ca|C|19
Current chains
- Chain Aa
- 25S rRNA
- Chain Ca
- 5.8S rRNA
Nearby chains
- Chain A
- 60S ribosomal protein L17-A
- Chain Fa
- 60S ribosomal protein L4-A
- Chain P
- 60S ribosomal protein L32
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