IL_6T83_327

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GAA*UACC

Length

7 nucleotides

Bulged bases

6T83|1|Aa|A|2397, 6T83|1|Aa|C|2983

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6T83_327 not in the Motif Atlas

Homologous match to IL_8C3A_097

Geometric discrepancy: 0.1831

The information below is about IL_8C3A_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54678.7

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

5

Unit IDs

6T83|1|Aa|G|2396
6T83|1|Aa|A|2397
6T83|1|Aa|A|2398
*
6T83|1|Aa|U|2981
6T83|1|Aa|A|2982
6T83|1|Aa|C|2983
6T83|1|Aa|C|2984

Current chains

Chain Aa

25S rRNA

Nearby chains

Chain A

60S ribosomal protein L17-A

Chain Ea

60S ribosomal protein L3