IL_6T83_343

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUCU*AACGUGAG

Length

12 nucleotides

Bulged bases

6T83|1|Aa|A|2941, 6T83|1|Aa|C|2942, 6T83|1|Aa|G|2945, 6T83|1|Aa|A|2946

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T83|1|Aa|C|2879
6T83|1|Aa|U|2880
6T83|1|Aa|C|2881
6T83|1|Aa|U|2882
*
6T83|1|Aa|A|2940
6T83|1|Aa|A|2941
6T83|1|Aa|C|2942
6T83|1|Aa|G|2943
6T83|1|Aa|U|2944
6T83|1|Aa|G|2945
6T83|1|Aa|A|2946
6T83|1|Aa|G|2947

Current chains

Chain Aa

25S rRNA

Nearby chains

Chain Ea

60S ribosomal protein L3

Chain G

60S ribosomal protein L23-A