IL_6T83_427
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UUGUCAG*CUUGGAUUUA
- Length
- 17 nucleotides
- Bulged bases
- 6T83|1|a|G|913
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_427 not in the Motif Atlas
- Homologous match to IL_8C3A_440
- Geometric discrepancy: 0.2901
- The information below is about IL_8C3A_440
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_22252.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
6T83|1|a|U|893
6T83|1|a|U|894
6T83|1|a|G|895
6T83|1|a|U|896
6T83|1|a|C|897
6T83|1|a|A|898
6T83|1|a|G|899
*
6T83|1|a|C|910
6T83|1|a|U|911
6T83|1|a|U|912
6T83|1|a|G|913
6T83|1|a|G|914
6T83|1|a|A|915
6T83|1|a|U|916
6T83|1|a|U|917
6T83|1|a|U|918
6T83|1|a|A|919
Current chains
- Chain a
- 18S rRNA
Nearby chains
- Chain Aa
- Large subunit ribosomal RNA; LSU rRNA
- Chain c
- 40S ribosomal protein S1-A
- Chain p
- 40S ribosomal protein S14-A
Coloring options: