IL_6T83_452
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GUCUAAC*GUAAUC
- Length
- 13 nucleotides
- Bulged bases
- 6T83|1|a|U|1491, 6T83|1|a|A|1516, 6T83|1|a|U|1517
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_452 not in the Motif Atlas
- Homologous match to IL_4V88_460
- Geometric discrepancy: 0.2231
- The information below is about IL_4V88_460
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_77092.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6T83|1|a|G|1488
6T83|1|a|U|1489
6T83|1|a|C|1490
6T83|1|a|U|1491
6T83|1|a|A|1492
6T83|1|a|A|1493
6T83|1|a|C|1494
*
6T83|1|a|G|1513
6T83|1|a|U|1514
6T83|1|a|A|1515
6T83|1|a|A|1516
6T83|1|a|U|1517
6T83|1|a|C|1518
Current chains
- Chain a
- 18S rRNA
Nearby chains
- Chain 4
- 40S ribosomal protein S29-A
- Chain e
- 40S ribosomal protein S3
- Chain u
- 40S ribosomal protein S19-A
- Chain v
- 40S ribosomal protein S20
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