3D structure

PDB id
6T83 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
GAGGUAAA*UUUAAAUAU
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6T83|1|1b|G|991
6T83|1|1b|A|992
6T83|1|1b|G|993
6T83|1|1b|G|994
6T83|1|1b|U|995
6T83|1|1b|A|996
6T83|1|1b|A|997
6T83|1|1b|A|998
*
6T83|1|1b|U|1050
6T83|1|1b|U|1051
6T83|1|1b|U|1052
6T83|1|1b|A|1053
6T83|1|1b|A|1054
6T83|1|1b|A|1055
6T83|1|1b|U|1056
6T83|1|1b|A|1057
6T83|1|1b|U|1058

Current chains

Chain 1b
25S rRNA

Nearby chains

Chain 4b
5S ribosomal RNA; 5S rRNA
Chain Dy
60S ribosomal protein L5
Chain Fy
60S ribosomal protein L7-A
Chain Iy
60S ribosomal protein L10
Chain Ty
60S ribosomal protein L21-A
Chain by
60S ribosomal protein L29

Coloring options:

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