IL_6T83_478

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GAAAAAAUUA*UAUAUUAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T83|1|2b|G|751
6T83|1|2b|A|752
6T83|1|2b|A|753
6T83|1|2b|A|754
6T83|1|2b|A|755
6T83|1|2b|A|756
6T83|1|2b|A|757
6T83|1|2b|U|758
6T83|1|2b|U|759
6T83|1|2b|A|760
*
6T83|1|2b|U|790
6T83|1|2b|A|791
6T83|1|2b|U|792
6T83|1|2b|A|793
6T83|1|2b|U|794
6T83|1|2b|U|795
6T83|1|2b|A|796
6T83|1|2b|G|797
6T83|1|2b|C|798

Current chains

Chain 2b

18S rRNA

Nearby chains

Chain Eb

40S ribosomal protein S4-A

Chain Jb

40S ribosomal protein S9-A

Chain Lb

40S ribosomal protein S11-A

Chain Wb

40S ribosomal protein S22-A