3D structure

PDB id
6T83 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
CGUAU*AAG
Length
8 nucleotides
Bulged bases
6T83|1|Aa|A|1103
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6T83_487 not in the Motif Atlas
Homologous match to IL_8P9A_264
Geometric discrepancy: 0.4073
The information below is about IL_8P9A_264
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_25463.1
Basepair signature
cWW-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

6T83|1|Aa|C|977
6T83|1|Aa|G|978
6T83|1|Aa|U|979
6T83|1|Aa|A|980
6T83|1|Aa|U|981
*
6T83|1|Aa|A|1102
6T83|1|Aa|A|1103
6T83|1|Aa|G|1104

Current chains

Chain Aa
25S rRNA

Nearby chains

Chain B
60S ribosomal protein L18-A
Chain Ia
60S ribosomal protein L7-A
Chain M
60S ribosomal protein L29

Coloring options:


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