IL_6T83_488
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CUCAUCAGACACCACAAAA*UGAAAAUGGAUGGCGCUCAAG
- Length
- 40 nucleotides
- Bulged bases
- 6T83|1|Aa|U|1191, 6T83|1|Aa|C|1192, 6T83|1|Aa|C|1196, 6T83|1|Aa|A|1302, 6T83|1|Aa|U|1305, 6T83|1|Aa|G|1306, 6T83|1|Aa|C|1316
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6T83|1|Aa|C|1187
6T83|1|Aa|U|1188
6T83|1|Aa|C|1189
6T83|1|Aa|A|1190
6T83|1|Aa|U|1191
6T83|1|Aa|C|1192
6T83|1|Aa|A|1193
6T83|1|Aa|G|1194
6T83|1|Aa|A|1195
6T83|1|Aa|C|1196
6T83|1|Aa|A|1197
6T83|1|Aa|C|1198
6T83|1|Aa|C|1199
6T83|1|Aa|A|1200
6T83|1|Aa|C|1201
6T83|1|Aa|A|1202
6T83|1|Aa|A|1203
6T83|1|Aa|A|1204
6T83|1|Aa|A|1205
*
6T83|1|Aa|U|1299
6T83|1|Aa|G|1300
6T83|1|Aa|A|1301
6T83|1|Aa|A|1302
6T83|1|Aa|A|1303
6T83|1|Aa|A|1304
6T83|1|Aa|U|1305
6T83|1|Aa|G|1306
6T83|1|Aa|G|1307
6T83|1|Aa|A|1308
6T83|1|Aa|U|1309
6T83|1|Aa|G|1310
6T83|1|Aa|G|1311
6T83|1|Aa|C|1312
6T83|1|Aa|G|1313
6T83|1|Aa|C|1314
6T83|1|Aa|U|1315
6T83|1|Aa|C|1316
6T83|1|Aa|A|1317
6T83|1|Aa|A|1318
6T83|1|Aa|G|1319
Current chains
- Chain Aa
- 25S rRNA
Nearby chains
- Chain Bb
- 5S ribosomal RNA; 5S rRNA
- Chain D
- 60S ribosomal protein L20-A
- Chain Ea
- 60S ribosomal protein L3
- Chain Ia
- 60S ribosomal protein L7-A
- Chain Ka
- 60S ribosomal protein L9-A
- Chain La
- 60S ribosomal protein L10
- Chain Oa
- 60S ribosomal protein L14-A
- Chain Q
- 60S ribosomal protein L33-A
- Chain Qa
- 60S ribosomal protein L16-A
- Chain X
- Ubiquitin-60S ribosomal protein L40
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