IL_6T83_491

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UCCUAAGGGGGGCUC*GAACA

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T83|1|Aa|U|2652
6T83|1|Aa|C|2653
6T83|1|Aa|C|2654
6T83|1|Aa|U|2655
6T83|1|Aa|A|2656
6T83|1|Aa|A|2657
6T83|1|Aa|G|2658
6T83|1|Aa|G|2659
6T83|1|Aa|G|2660
6T83|1|Aa|G|2661
6T83|1|Aa|G|2662
6T83|1|Aa|G|2663
6T83|1|Aa|C|2664
6T83|1|Aa|U|2665
6T83|1|Aa|C|2666
*
6T83|1|Aa|G|2690
6T83|1|Aa|A|2691
6T83|1|Aa|A|2692
6T83|1|Aa|C|2693
6T83|1|Aa|A|2694

Current chains

Chain Aa

25S rRNA

Nearby chains

Chain 8

Transfer RNA; tRNA

Chain Bb

5S ribosomal RNA; 5S rRNA

Chain Ga

60S ribosomal protein L5

Chain Ma

60S ribosomal protein L11-A

Chain Z

60S ribosomal protein L42-A