IL_6TB3_127

3D structure

PDB id

6TB3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGUAUC*GAAG

Length

10 nucleotides

Bulged bases

6TB3|1|BQ|U|981, 6TB3|1|BQ|A|1103

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TB3|1|BQ|C|977
6TB3|1|BQ|G|978
6TB3|1|BQ|U|979
6TB3|1|BQ|A|980
6TB3|1|BQ|U|981
6TB3|1|BQ|C|982
*
6TB3|1|BQ|G|1101
6TB3|1|BQ|A|1102
6TB3|1|BQ|A|1103
6TB3|1|BQ|G|1104

Current chains

Chain BQ

25S rRNA

Nearby chains

Chain AV

60S ribosomal protein L29

Chain BB

60S ribosomal protein L18-A

Chain BO

60S ribosomal protein L7-A