IL_6TBV_056
3D structure
- PDB id
- 6TBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6TBV_056 not in the Motif Atlas
- Geometric match to IL_5J7L_050
- Geometric discrepancy: 0.06
- The information below is about IL_5J7L_050
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
6TBV|1|16S1|G|1061
6TBV|1|16S1|U|1062
6TBV|1|16S1|C|1063
*
6TBV|1|16S1|G|1193
6TBV|1|16S1|U|1194
6TBV|1|16S1|C|1195
Current chains
- Chain 16S1
- 16S rRNA
Nearby chains
- Chain S031
- 30S ribosomal protein S3
- Chain S051
- 30S ribosomal protein S5
- Chain S101
- 30S ribosomal protein S10
- Chain S141
- 30S ribosomal protein S14
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