IL_6TBV_194

3D structure

PDB id

6TBV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGGAGGC*GCCGACCUUGAAAUACC

Length

24 nucleotides

Bulged bases

6TBV|1|23S1|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TBV|1|23S1|G|2123
6TBV|1|23S1|G|2124
6TBV|1|23S1|G|2125
6TBV|1|23S1|A|2126
6TBV|1|23S1|G|2127
6TBV|1|23S1|G|2128
6TBV|1|23S1|C|2129
*
6TBV|1|23S1|G|2159
6TBV|1|23S1|C|2160
6TBV|1|23S1|C|2161
6TBV|1|23S1|G|2162
6TBV|1|23S1|A|2163
6TBV|1|23S1|C|2164
6TBV|1|23S1|C|2165
6TBV|1|23S1|U|2166
6TBV|1|23S1|U|2167
6TBV|1|23S1|G|2168
6TBV|1|23S1|A|2169
6TBV|1|23S1|A|2170
6TBV|1|23S1|A|2171
6TBV|1|23S1|U|2172
6TBV|1|23S1|A|2173
6TBV|1|23S1|C|2174
6TBV|1|23S1|C|2175

Current chains

Chain 23S1

23S rRNA

Nearby chains