IL_6TH6_011

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

GAUUAG*CGAAGAUC

Length

14 nucleotides

Bulged bases

6TH6|1|Aa|U|232, 6TH6|1|Aa|A|268

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TH6|1|Aa|G|230
6TH6|1|Aa|A|231
6TH6|1|Aa|U|232
6TH6|1|Aa|U|233
6TH6|1|Aa|A|234
6TH6|1|Aa|G|235
*
6TH6|1|Aa|C|265
6TH6|1|Aa|G|266
6TH6|1|Aa|A|267
6TH6|1|Aa|A|268
6TH6|1|Aa|G|269
6TH6|1|Aa|A|270
6TH6|1|Aa|U|271
6TH6|1|Aa|C|272

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ak

30S ribosomal protein S8e

Chain Ao

30S ribosomal protein S12

Chain As

30S ribosomal protein S17

Chain BA

Large subunit ribosomal RNA; LSU rRNA