IL_6TH6_021

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

GUGGCAG*CGGUAAUAC

Length

16 nucleotides

Bulged bases

6TH6|1|Aa|A|477, 6TH6|1|Aa|U|479, 6TH6|1|Aa|A|480

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TH6|1|Aa|G|460
6TH6|1|Aa|U|461
6TH6|1|Aa|G|462
6TH6|1|Aa|G|463
6TH6|1|Aa|C|464
6TH6|1|Aa|A|465
6TH6|1|Aa|G|466
*
6TH6|1|Aa|C|473
6TH6|1|Aa|G|474
6TH6|1|Aa|G|475
6TH6|1|Aa|U|476
6TH6|1|Aa|A|477
6TH6|1|Aa|A|478
6TH6|1|Aa|U|479
6TH6|1|Aa|A|480
6TH6|1|Aa|C|481

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ac

30S ribosomal protein S3

Chain Ao

30S ribosomal protein S12