IL_6TH6_023

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CGUA(OMG)C*GUGAGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TH6|1|Aa|C|525
6TH6|1|Aa|G|526
6TH6|1|Aa|U|527
6TH6|1|Aa|A|528
6TH6|1|Aa|OMG|529
6TH6|1|Aa|C|530
*
6TH6|1|Aa|G|702
6TH6|1|Aa|U|703
6TH6|1|Aa|G|704
6TH6|1|Aa|A|705
6TH6|1|Aa|G|706
6TH6|1|Aa|G|707

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Aj

30S ribosomal protein S8

Chain Ao

30S ribosomal protein S12

Chain Aq

30S ribosomal protein S15

Chain As

30S ribosomal protein S17

Chain BA

Large subunit ribosomal RNA; LSU rRNA