IL_6TH6_090
3D structure
- PDB id
- 6TH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of T. kodakarensis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- CGCAG*CGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6TH6_090 not in the Motif Atlas
- Homologous match to IL_4V9F_022
- Geometric discrepancy: 0.1133
- The information below is about IL_4V9F_022
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.2
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
6TH6|1|BA|C|739
6TH6|1|BA|G|740
6TH6|1|BA|C|741
6TH6|1|BA|A|742
6TH6|1|BA|G|743
*
6TH6|1|BA|C|754
6TH6|1|BA|G|755
6TH6|1|BA|A|756
6TH6|1|BA|G|757
6TH6|1|BA|G|758
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BR
- 50S ribosomal protein L18e
Coloring options: