IL_6TH6_137

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CAGCUAG*UUU(OMG)UAC(OMU)G

Length

16 nucleotides

Bulged bases

6TH6|1|BA|U|1929, 6TH6|1|BA|U|1944, 6TH6|1|BA|C|1948

QA status

Modified nucleotides: OMG, OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TH6|1|BA|C|1925
6TH6|1|BA|A|1926
6TH6|1|BA|G|1927
6TH6|1|BA|C|1928
6TH6|1|BA|U|1929
6TH6|1|BA|A|1930
6TH6|1|BA|G|1931
*
6TH6|1|BA|U|1942
6TH6|1|BA|U|1943
6TH6|1|BA|U|1944
6TH6|1|BA|OMG|1945
6TH6|1|BA|U|1946
6TH6|1|BA|A|1947
6TH6|1|BA|C|1948
6TH6|1|BA|OMU|1949
6TH6|1|BA|G|1950

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain Aa

Small subunit ribosomal RNA; SSU rRNA

Chain BC

50S ribosomal protein L2

Chain Bg

50S ribosomal protein L37Ae