IL_6TMF_017

3D structure

PDB id

6TMF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an archaeal ABCE1-bound ribosomal post-splitting complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUGGCAG*CGGUAAUAC

Length

16 nucleotides

Bulged bases

6TMF|1|A|A|474, 6TMF|1|A|U|476, 6TMF|1|A|A|477

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TMF|1|A|G|457
6TMF|1|A|U|458
6TMF|1|A|G|459
6TMF|1|A|G|460
6TMF|1|A|C|461
6TMF|1|A|A|462
6TMF|1|A|G|463
*
6TMF|1|A|C|470
6TMF|1|A|G|471
6TMF|1|A|G|472
6TMF|1|A|U|473
6TMF|1|A|A|474
6TMF|1|A|A|475
6TMF|1|A|U|476
6TMF|1|A|A|477
6TMF|1|A|C|478

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain C

30S ribosomal protein S3

Chain O

30S ribosomal protein S12