IL_6TMF_022

3D structure

PDB id

6TMF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an archaeal ABCE1-bound ribosomal post-splitting complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCGAAAUC*GGCUUGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TMF|1|A|G|546
6TMF|1|A|C|547
6TMF|1|A|G|548
6TMF|1|A|A|549
6TMF|1|A|A|550
6TMF|1|A|A|551
6TMF|1|A|U|552
6TMF|1|A|C|553
*
6TMF|1|A|G|571
6TMF|1|A|G|572
6TMF|1|A|C|573
6TMF|1|A|U|574
6TMF|1|A|U|575
6TMF|1|A|G|576
6TMF|1|A|C|577

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain E

30S ribosomal protein S4

Chain F

30S ribosomal protein S4e

Chain J

30S ribosomal protein S8

Chain S

30S ribosomal protein S17