IL_6TNN_033

3D structure

PDB id

6TNN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

ACUAGGGGC*GUUACCGAAU

Length

19 nucleotides

Bulged bases

6TNN|1|U|A|941, 6TNN|1|U|C|943

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TNN|1|U|A|920
6TNN|1|U|C|921
6TNN|1|U|U|922
6TNN|1|U|A|923
6TNN|1|U|G|924
6TNN|1|U|G|925
6TNN|1|U|G|926
6TNN|1|U|G|927
6TNN|1|U|C|928
*
6TNN|1|U|G|938
6TNN|1|U|U|939
6TNN|1|U|U|940
6TNN|1|U|A|941
6TNN|1|U|C|942
6TNN|1|U|C|943
6TNN|1|U|G|944
6TNN|1|U|A|945
6TNN|1|U|A|946
6TNN|1|U|U|947

Current chains

Chain U

pre-23S rRNA

Nearby chains

Chain f

50S ribosomal protein L16