IL_6TNN_044
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- CGU*AGUG
- Length
- 7 nucleotides
- Bulged bases
- 6TNN|1|U|G|1286
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6TNN_044 not in the Motif Atlas
- Homologous match to IL_4WF9_044
- Geometric discrepancy: 0.1074
- The information below is about IL_4WF9_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_42997.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 23
Unit IDs
6TNN|1|U|C|1235
6TNN|1|U|G|1236
6TNN|1|U|U|1237
*
6TNN|1|U|A|1285
6TNN|1|U|G|1286
6TNN|1|U|U|1287
6TNN|1|U|G|1288
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain Y
- 50S ribosomal protein L4
- Chain e
- 50S ribosomal protein L15
- Chain j
- 50S ribosomal protein L20
Coloring options: