IL_6TNN_090
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- CAG*CGCAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6TNN_090 not in the Motif Atlas
- Homologous match to IL_4WF9_086
- Geometric discrepancy: 0.2366
- The information below is about IL_4WF9_086
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_14250.1
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 10
Unit IDs
6TNN|1|U|C|2324
6TNN|1|U|A|2325
6TNN|1|U|G|2326
*
6TNN|1|U|C|2344
6TNN|1|U|G|2345
6TNN|1|U|C|2346
6TNN|1|U|A|2347
6TNN|1|U|G|2348
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain V
- 5S ribosomal RNA; 5S rRNA
- Chain Z
- 50S ribosomal protein L5
- Chain h
- 50S ribosomal protein L18
Coloring options: