IL_6TNN_122

3D structure

PDB id

6TNN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

CCAAGCAGUUAG*CUGAGCUGUGAUG

Length

25 nucleotides

Bulged bases

6TNN|1|U|U|1568

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TNN|1|U|C|1512
6TNN|1|U|C|1513
6TNN|1|U|A|1514
6TNN|1|U|A|1515
6TNN|1|U|G|1516
6TNN|1|U|C|1517
6TNN|1|U|A|1518
6TNN|1|U|G|1519
6TNN|1|U|U|1520
6TNN|1|U|U|1521
6TNN|1|U|A|1522
6TNN|1|U|G|1523
*
6TNN|1|U|C|1557
6TNN|1|U|U|1558
6TNN|1|U|G|1559
6TNN|1|U|A|1560
6TNN|1|U|G|1561
6TNN|1|U|C|1562
6TNN|1|U|U|1563
6TNN|1|U|G|1564
6TNN|1|U|U|1565
6TNN|1|U|G|1566
6TNN|1|U|A|1567
6TNN|1|U|U|1568
6TNN|1|U|G|1569

Current chains

Chain U

pre-23S rRNA

Nearby chains