IL_6TNN_124

3D structure

PDB id

6TNN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

UGGAAGG*CCCCA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TNN|1|U|U|1871
6TNN|1|U|G|1872
6TNN|1|U|G|1873
6TNN|1|U|A|1874
6TNN|1|U|A|1875
6TNN|1|U|G|1876
6TNN|1|U|G|1877
*
6TNN|1|U|C|1919
6TNN|1|U|C|1920
6TNN|1|U|C|1921
6TNN|1|U|C|1922
6TNN|1|U|A|1923

Current chains

Chain U

pre-23S rRNA

Nearby chains

Chain W

50S ribosomal protein L2