IL_6TNN_125

3D structure

PDB id

6TNN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

GUACAGGAUAGGUAGGAG*CAUCGGUGGGAUACUACCC

Length

37 nucleotides

Bulged bases

6TNN|1|U|A|2144, 6TNN|1|U|G|2192

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TNN|1|U|G|2137
6TNN|1|U|U|2138
6TNN|1|U|A|2139
6TNN|1|U|C|2140
6TNN|1|U|A|2141
6TNN|1|U|G|2142
6TNN|1|U|G|2143
6TNN|1|U|A|2144
6TNN|1|U|U|2145
6TNN|1|U|A|2146
6TNN|1|U|G|2147
6TNN|1|U|G|2148
6TNN|1|U|U|2149
6TNN|1|U|A|2150
6TNN|1|U|G|2151
6TNN|1|U|G|2152
6TNN|1|U|A|2153
6TNN|1|U|G|2154
*
6TNN|1|U|C|2188
6TNN|1|U|A|2189
6TNN|1|U|U|2190
6TNN|1|U|C|2191
6TNN|1|U|G|2192
6TNN|1|U|G|2193
6TNN|1|U|U|2194
6TNN|1|U|G|2195
6TNN|1|U|G|2196
6TNN|1|U|G|2197
6TNN|1|U|A|2198
6TNN|1|U|U|2199
6TNN|1|U|A|2200
6TNN|1|U|C|2201
6TNN|1|U|U|2202
6TNN|1|U|A|2203
6TNN|1|U|C|2204
6TNN|1|U|C|2205
6TNN|1|U|C|2206

Current chains

Chain U

pre-23S rRNA

Nearby chains