IL_6TNU_067
3D structure
- PDB id
- 6TNU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAC*GAG
- Length
- 7 nucleotides
- Bulged bases
- 6TNU|1|2|U|1340
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6TNU_067 not in the Motif Atlas
- Homologous match to IL_4V88_455
- Geometric discrepancy: 0.1946
- The information below is about IL_4V88_455
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
6TNU|1|2|C|1339
6TNU|1|2|U|1340
6TNU|1|2|A|1341
6TNU|1|2|C|1342
*
6TNU|1|2|G|1383
6TNU|1|2|A|1384
6TNU|1|2|G|1385
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain F
- 40S ribosomal protein S16-A
- Chain G
- 40S ribosomal protein S17-B
- Chain J
- 40S ribosomal protein S20
- Chain O
- Guanine nucleotide-binding protein subunit beta-like protein
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